SNP Detail For rs1436351
1.Mapping Information
Human SNP ID rs1436351
Human chromosome chr3
Human SNP position 104899129
Pig chromosome chr13
Pig SNP position 163678679
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region3q13.11
Chromosome idchr3
Chromosome position104899129
Reported geneALCAM
Mapped geneLOC105374022 - LOC105374023
Upstream gene id105374022
Downstream gene id105374023
SNP gene ids
Upstream gene distance92525
Downstream gene distance96512
SNP risk allelers1436351-T
SNPsrs1436351
Merged0
SNP id current1436351
Contextintergenic_variant
Intergenic1
Allele frequency0.755
P value0.000008
Pvalue mlog5.09691001300805
P value text(EA)
Or beta0.016
%95 Ci[0.0087-0.0229] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region3q13.11
Chromosome idchr3
Chromosome position104899129
Reported geneALCAM
Mapped geneLOC105374022 - LOC105374023
Upstream gene id105374022
Downstream gene id105374023
SNP gene ids
Upstream gene distance92525
Downstream gene distance96512
SNP risk allelers1436351-T
SNPsrs1436351
Merged0
SNP id current1436351
Contextintergenic_variant
Intergenic1
Allele frequency0.745
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.016
%95 Ci[0.009-0.0224] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783