SNP Detail For rs143087368
1.Mapping Information
Human SNP ID rs143087368
Human chromosome chr3
Human SNP position 133910095
Pig chromosome chr13
Pig SNP position 82586148
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q22.1
Chromosome idchr3
Chromosome position133910095
Reported geneIntergenic
Mapped geneRAB6B - C3orf36
Upstream gene id51560
Downstream gene id80111
SNP gene ids
Upstream gene distance14248
Downstream gene distance18050
SNP risk allelers143087368-G
SNPsrs143087368
Merged0
SNP id current143087368
Contextintergenic_variant
Intergenic1
Allele frequency0.996
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.187
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264