Human SNP ID | rs1430246 |
---|---|
Human chromosome | chr2 |
Human SNP position | 221314147 |
Pig chromosome | chr15 |
Pig SNP position | 136623920 |
PubMed ID | 24811271 |
---|---|
Journal | Immunogenetics |
Link | www.ncbi.nlm.nih.gov/pubmed/24811271 |
Study | Genome-wide SNP associations with rubella-specific cytokine responses in measles-mumps-rubella vaccine recipients. |
Disease/Trait | Immune response to measles-mumps-rubella vaccine |
Initial sample | 883 European ancestry individuals |
Replication sample | NA |
Region | 2q36.1 |
Chromosome id | chr2 |
Chromosome position | 221314147 |
Reported gene | EPHA4, SLC4A3 |
Mapped gene | LOC105373896 - EPHA4 |
Upstream gene id | 105373896 |
Downstream gene id | 2043 |
SNP gene ids | |
Upstream gene distance | 515804 |
Downstream gene distance | 103880 |
SNP risk allele | rs1430246-? |
SNPs | rs1430246 |
Merged | 0 |
SNP id current | 1430246 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (IFN gamma response) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | response to vaccine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004645 |
Study accession | GCST002441 |