SNP Detail For rs1430246
1.Mapping Information
Human SNP ID rs1430246
Human chromosome chr2
Human SNP position 221314147
Pig chromosome chr15
Pig SNP position 136623920
2.Annotation Information
PubMed ID24811271
JournalImmunogenetics
Linkwww.ncbi.nlm.nih.gov/pubmed/24811271
StudyGenome-wide SNP associations with rubella-specific cytokine responses in measles-mumps-rubella vaccine recipients.
Disease/TraitImmune response to measles-mumps-rubella vaccine
Initial sample883 European ancestry individuals
Replication sampleNA
Region2q36.1
Chromosome idchr2
Chromosome position221314147
Reported geneEPHA4, SLC4A3
Mapped geneLOC105373896 - EPHA4
Upstream gene id105373896
Downstream gene id2043
SNP gene ids
Upstream gene distance515804
Downstream gene distance103880
SNP risk allelers1430246-?
SNPsrs1430246
Merged0
SNP id current1430246
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.0000002
Pvalue mlog6.69897000433601
P value text(IFN gamma response)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST002441