SNP Detail For rs142944815
1.Mapping Information
Human SNP ID rs142944815
Human chromosome chr9
Human SNP position 8773566
Pig chromosome chr1
Pig SNP position 238471879
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region9p24.1
Chromosome idchr9
Chromosome position8773566
Reported genePTPRD
Mapped genePTPRD
Upstream gene id
Downstream gene id
SNP gene ids5789
Upstream gene distance
Downstream gene distance
SNP risk allelers142944815-G
SNPsrs142944815
Merged0
SNP id current142944815
Contextintron_variant
Intergenic0
Allele frequency1
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.39
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264