SNP Detail For rs1426153
1.Mapping Information
Human SNP ID rs1426153
Human chromosome chr11
Human SNP position 125300743
Pig chromosome chr9
Pig SNP position 58070404
2.Annotation Information
PubMed ID22488850
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22488850
StudyGenome-wide search for replicable risk gene regions in alcohol and nicotine co-dependence.
Disease/TraitAlcohol and nictotine co-dependence
Initial sample818 European ancestry cases, 1,396 European ancestry controls, 449 African American cases, 480 African American controls
Replication sampleNA
Region11q24.2
Chromosome idchr11
Chromosome position125300743
Reported genePKNOX2
Mapped genePKNOX2
Upstream gene id
Downstream gene id
SNP gene ids63876
Upstream gene distance
Downstream gene distance
SNP risk allelers1426153-?
SNPsrs1426153
Merged0
SNP id current1426153
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [805814]
CNVN
Mapped traitalcohol and nicotine codependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004776
Study accessionGCST001471