SNP Detail For rs1424760
1.Mapping Information
Human SNP ID rs1424760
Human chromosome chr2
Human SNP position 162925277
Pig chromosome chr15
Pig SNP position 77418428
2.Annotation Information
PubMed ID22359512
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22359512
StudyGenome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations.
Disease/TraitPhospholipid levels (plasma)
Initial sample4,034 European ancestry individuals
Replication sampleNA
Region2q24.3
Chromosome idchr2
Chromosome position162925277
Reported geneKCNH7
Mapped geneLOC105373725 - RPL7P61
Upstream gene id105373725
Downstream gene id101929589
SNP gene ids
Upstream gene distance70505
Downstream gene distance226948
SNP risk allelers1424760-?
SNPsrs1424760
Merged0
SNP id current1424760
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000004
Pvalue mlog7.39794000867203
P value text(proportions)
Or beta0.7
%95 Ci[NR] % increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitphospholipid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004639
Study accessionGCST001414