SNP Detail For rs142089946
1.Mapping Information
Human SNP ID rs142089946
Human chromosome chr5
Human SNP position 61495766
Pig chromosome chr16
Pig SNP position 43256825
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region5q12.1
Chromosome idchr5
Chromosome position61495766
Reported geneNR
Mapped geneZSWIM6
Upstream gene id
Downstream gene id
SNP gene ids57688
Upstream gene distance
Downstream gene distance
SNP risk allelers142089946-G
SNPsrs142089946
Merged
SNP id current142089946
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta1.1363636
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048