SNP Detail For rs1420103
1.Mapping Information
Human SNP ID rs1420103
Human chromosome chr2
Human SNP position 102332172
Pig chromosome chr3
Pig SNP position 54505733
2.Annotation Information
PubMed ID23999434
JournalJ Clin Invest
Linkwww.ncbi.nlm.nih.gov/pubmed/23999434
StudyCommon genetic variation at the IL1RL1 locus regulates IL-33/ST2 signaling.
Disease/TraitSerum protein levels (sST2)
Initial sample2,797 individuals
Replication sampleNA
Region2q12.1
Chromosome idchr2
Chromosome position102332172
Reported geneIL1RL1
Mapped geneIL1RL1
Upstream gene id
Downstream gene id
SNP gene ids9173
Upstream gene distance
Downstream gene distance
SNP risk allelers1420103-A
SNPsrs1420103
Merged0
SNP id current1420103
Contextintron_variant
Intergenic0
Allele frequency0.23
P value1E-35
Pvalue mlog35
P value text
Or beta0.13
%95 Ci[0.11-0.15] unit increase
PlatformAffymetrix [2500000] (imputed)
CNVN
Mapped traitserum ST2 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005416
Study accessionGCST002166