SNP Detail For rs142001454
1.Mapping Information
Human SNP ID rs142001454
Human chromosome chr5
Human SNP position 164341532
Pig chromosome chr16
Pig SNP position 64211082
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q34
Chromosome idchr5
Chromosome position164341532
Reported geneIntergenic
Mapped geneLOC105377703
Upstream gene id
Downstream gene id
SNP gene ids105377703
Upstream gene distance
Downstream gene distance
SNP risk allelers142001454-C
SNPsrs142001454
Merged0
SNP id current142001454
Contextintron_variant
Intergenic0
Allele frequency0.99
P value0.0000001
Pvalue mlog7
P value text(AA)
Or beta0.107
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264