SNP Detail For rs141892389
1.Mapping Information
Human SNP ID rs141892389
Human chromosome chr7
Human SNP position 152019626
Pig chromosome chr18
Pig SNP position 5663518
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region7q36.1
Chromosome idchr7
Chromosome position152019626
Reported geneGALNTL5
Mapped geneGALNTL5
Upstream gene id
Downstream gene id
SNP gene ids168391
Upstream gene distance
Downstream gene distance
SNP risk allelers141892389-A
SNPsrs141892389
Merged0
SNP id current141892389
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta0.495
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264