SNP Detail For rs141332792
1.Mapping Information
Human SNP ID rs141332792
Human chromosome chr3
Human SNP position 159294501
Pig chromosome chr13
Pig SNP position 107410492
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q25.32
Chromosome idchr3
Chromosome position159294501
Reported geneIQCJ-SCHIP1
Mapped geneIQCJ-SCHIP1, SCHIP1
Upstream gene id
Downstream gene id
SNP gene ids100505385, 29970
Upstream gene distance
Downstream gene distance
SNP risk allelers141332792-G
SNPsrs141332792
Merged0
SNP id current141332792
Contextintron_variant
Intergenic0
Allele frequency1
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.631
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264