SNP Detail For rs141088253
1.Mapping Information
Human SNP ID rs141088253
Human chromosome chr8
Human SNP position 5426774
Pig chromosome chr15
Pig SNP position 41693740
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region8p23.2
Chromosome idchr8
Chromosome position5426774
Reported geneIntergenic
Mapped geneLOC107986907 - RPL23AP54
Upstream gene id107986907
Downstream gene id100271466
SNP gene ids
Upstream gene distance280927
Downstream gene distance49735
SNP risk allelers141088253-G
SNPsrs141088253
Merged0
SNP id current141088253
Contextintergenic_variant
Intergenic1
Allele frequency0.999
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta0.384
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264