SNP Detail For rs140798517
1.Mapping Information
Human SNP ID rs140798517
Human chromosome chr3
Human SNP position 133878284
Pig chromosome chr13
Pig SNP position 82557815
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q22.1
Chromosome idchr3
Chromosome position133878284
Reported geneRAB6B
Mapped geneRAB6B
Upstream gene id
Downstream gene id
SNP gene ids51560
Upstream gene distance
Downstream gene distance
SNP risk allelers140798517-C
SNPsrs140798517
Merged0
SNP id current140798517
Contextintron_variant
Intergenic0
Allele frequency0.996
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.188
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264