SNP Detail For rs140385970
1.Mapping Information
Human SNP ID rs140385970
Human chromosome chr17
Human SNP position 61482988
Pig chromosome chr12
Pig SNP position 38255064
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region17q23.2
Chromosome idchr17
Chromosome position61482988
Reported geneTBX4
Mapped geneTBX4
Upstream gene id
Downstream gene id
SNP gene ids9496
Upstream gene distance
Downstream gene distance
SNP risk allelers140385970-T
SNPsrs140385970
Merged0
SNP id current140385970
Contextsynonymous_variant
Intergenic0
Allele frequency0.002
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.306
%95 CiNR unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265