SNP Detail For rs1401796
1.Mapping Information
Human SNP ID rs1401796
Human chromosome chr17
Human SNP position 56762398
Pig chromosome chr12
Pig SNP position 33894873
2.Annotation Information
PubMed ID20881960
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20881960
StudyHundreds of variants clustered in genomic loci and biological pathways affect human height.
Disease/TraitHeight
Initial sample133,653 European ancestry individuals
Replication sample50,074 European ancestry individuals
Region17q22
Chromosome idchr17
Chromosome position56762398
Reported geneNOG
Mapped geneNOG - C17orf67
Upstream gene id9241
Downstream gene id339210
SNP gene ids
Upstream gene distance166808
Downstream gene distance29515
SNP risk allelers1401796-?
SNPsrs1401796
Merged0
SNP id current1401796
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000002
Pvalue mlog7.69897000433601
P value text(Conditioned on rs227724)
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [2834208] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000817