SNP Detail For rs1397048
1.Mapping Information
Human SNP ID rs1397048
Human chromosome chr11
Human SNP position 56698623
Pig chromosome chr2
Pig SNP position 14052891
2.Annotation Information
PubMed ID17903294
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903294
StudyGenome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study.
Disease/TraitHemostatic factors and hematological phenotypes
Initial sampleUp to 1,062 European ancestry individuals
Replication sampleNA
Region11q12.1
Chromosome idchr11
Chromosome position56698623
Reported geneOR5AR1, OR9G1, OR9G4, OR5AP2
Mapped geneOR5AR1 - OR9G1
Upstream gene id219493
Downstream gene id390174
SNP gene ids
Upstream gene distance34005
Downstream gene distance1765
SNP risk allelers1397048-?
SNPsrs1397048
Merged0
SNP id current1397048
Contextupstream_gene_variant
Intergenic1
Allele frequency0.4
P value0.00000007
Pvalue mlog7.15490195998574
P value text(MCH)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitmean corpuscular hemoglobin
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004527
Study accessionGCST000080