Human SNP ID | rs1397048 |
---|---|
Human chromosome | chr11 |
Human SNP position | 56698623 |
Pig chromosome | chr2 |
Pig SNP position | 14052891 |
PubMed ID | 17903294 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/17903294 |
Study | Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. |
Disease/Trait | Hemostatic factors and hematological phenotypes |
Initial sample | Up to 1,062 European ancestry individuals |
Replication sample | NA |
Region | 11q12.1 |
Chromosome id | chr11 |
Chromosome position | 56698623 |
Reported gene | OR5AR1, OR9G1, OR9G4, OR5AP2 |
Mapped gene | OR5AR1 - OR9G1 |
Upstream gene id | 219493 |
Downstream gene id | 390174 |
SNP gene ids | |
Upstream gene distance | 34005 |
Downstream gene distance | 1765 |
SNP risk allele | rs1397048-? |
SNPs | rs1397048 |
Merged | 0 |
SNP id current | 1397048 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.4 |
P value | 0.00000007 |
Pvalue mlog | 7.15490195998574 |
P value text | (MCH) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [70897] |
CNV | N |
Mapped trait | mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST000080 |