SNP Detail For rs139236384
1.Mapping Information
Human SNP ID rs139236384
Human chromosome chr12
Human SNP position 82156246
Pig chromosome chr5
Pig SNP position 104259025
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region12q21.31
Chromosome idchr12
Chromosome position82156246
Reported geneIntergenic
Mapped geneLOC105369873
Upstream gene id
Downstream gene id
SNP gene ids105369873
Upstream gene distance
Downstream gene distance
SNP risk allelers139236384-G
SNPsrs139236384
Merged0
SNP id current139236384
Contextintergenic_variant
Intergenic0
Allele frequency1
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta2.192
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262