Human SNP ID | rs139134142 |
---|---|
Human chromosome | chr14 |
Human SNP position | 91603145 |
Pig chromosome | chr2 |
Pig SNP position | 100745603 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 in COPD |
Initial sample | 5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases |
Replication sample | NA |
Region | 14q32.12 |
Chromosome id | chr14 |
Chromosome position | 91603145 |
Reported gene | CATSPERB |
Mapped gene | POLR3GP1, CATSPERB |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100422395, 79820 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs139134142-A |
SNPs | rs139134142 |
Merged | 0 |
SNP id current | 139134142 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.985 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (AA) |
Or beta | 0.49 |
%95 Ci | NR unit decrease |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST003263 |