SNP Detail For rs1388551
1.Mapping Information
Human SNP ID rs1388551
Human chromosome chr3
Human SNP position 22251079
Pig chromosome chr13
Pig SNP position 10355808
2.Annotation Information
PubMed ID23192594
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23192594
StudyGene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study.
Disease/TraitWaist-to-hip circumference ratio (interaction)
Initial sample8,203 African American females, 3,484 Hispanic females
Replication sampleNA
Region3p24.3
Chromosome idchr3
Chromosome position22251079
Reported geneLOC728516, ZNF385D
Mapped geneZNF385D
Upstream gene id
Downstream gene id
SNP gene ids79750
Upstream gene distance
Downstream gene distance
SNP risk allelers1388551-A
SNPsrs1388551
Merged0
SNP id current1388551
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA, Recreational physical activity)
Or beta0.07
%95 Ci[0.04-0.10] unit decrease
PlatformAffymetrix [706791]
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST001754