Human SNP ID | rs1387221 |
---|---|
Human chromosome | chr8 |
Human SNP position | 58688998 |
Pig chromosome | chr4 |
Pig SNP position | 81002927 |
PubMed ID | 25656473 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25656473 |
Study | Genome-wide association study of lymphoblast cell viability after clozapine exposure. |
Disease/Trait | Clozapine-induced cytotoxicity |
Initial sample | 90 European ancestry lymphoblast cell lines |
Replication sample | NA |
Region | 8q12.1 |
Chromosome id | chr8 |
Chromosome position | 58688998 |
Reported gene | intergenic |
Mapped gene | NSMAF - LOC105375858 |
Upstream gene id | 8439 |
Downstream gene id | 105375858 |
SNP gene ids | |
Upstream gene distance | 29153 |
Downstream gene distance | 50528 |
SNP risk allele | rs1387221-? |
SNPs | rs1387221 |
Merged | 0 |
SNP id current | 1387221 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (AUC) |
Or beta | |
%95 Ci | |
Platform | NR [2092490] |
CNV | N |
Mapped trait | cytotoxicity measurement, response to clozapine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006952, http://purl.obolibrary.org/obo/GO_0097338 |
Study accession | GCST002777 |