SNP Detail For rs138607199
1.Mapping Information
Human SNP ID rs138607199
Human chromosome chr13
Human SNP position 67693880
Pig chromosome chr11
Pig SNP position 43704679
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region13q21.32
Chromosome idchr13
Chromosome position67693880
Reported geneIntergenic
Mapped geneLOC105370250 - LOC107984622
Upstream gene id105370250
Downstream gene id107984622
SNP gene ids
Upstream gene distance33570
Downstream gene distance16337
SNP risk allelers138607199-A
SNPsrs138607199
Merged0
SNP id current138607199
Contextintergenic_variant
Intergenic1
Allele frequency0.989
P value0.0000004
Pvalue mlog6.39794000867203
P value text(AA)
Or beta0.08
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264