Human SNP ID | rs1385167 |
---|---|
Human chromosome | chr2 |
Human SNP position | 65973514 |
Pig chromosome | chr3 |
Pig SNP position | 79798841 |
PubMed ID | 25673412 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 65973514 |
Reported gene | MEIS1 |
Mapped gene | LOC105369168 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369168 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1385167-G |
SNPs | rs1385167 |
Merged | 0 |
SNP id current | 1385167 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1496 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (EA, men) |
Or beta | 0.0363 |
%95 Ci | [0.023-0.05] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 65973514 |
Reported gene | MEIS1 |
Mapped gene | LOC105369168 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369168 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1385167-G |
SNPs | rs1385167 |
Merged | 0 |
SNP id current | 1385167 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1475 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | (EA) |
Or beta | 0.0293 |
%95 Ci | [0.02-0.039] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 65973514 |
Reported gene | MEIS1 |
Mapped gene | LOC105369168 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369168 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1385167-G |
SNPs | rs1385167 |
Merged | 0 |
SNP id current | 1385167 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1549 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (men) |
Or beta | 0.0315 |
%95 Ci | [0.018-0.045] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 65973514 |
Reported gene | MEIS1 |
Mapped gene | LOC105369168 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105369168 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1385167-G |
SNPs | rs1385167 |
Merged | 0 |
SNP id current | 1385167 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1556 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.0265 |
%95 Ci | [0.017-0.036] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |