SNP Detail For rs138465513
1.Mapping Information
Human SNP ID rs138465513
Human chromosome chr3
Human SNP position 159017006
Pig chromosome chr13
Pig SNP position 107146244
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3q25.32
Chromosome idchr3
Chromosome position159017006
Reported geneIntergenic
Mapped geneLOC105374181 - IQCJ
Upstream gene id105374181
Downstream gene id654502
SNP gene ids
Upstream gene distance143770
Downstream gene distance52246
SNP risk allelers138465513-G
SNPsrs138465513
Merged0
SNP id current138465513
Contextintron_variant
Intergenic1
Allele frequency1
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.914
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264