SNP Detail For rs1383484
1.Mapping Information
Human SNP ID rs1383484
Human chromosome chr15
Human SNP position 83854003
Pig chromosome chr7
Pig SNP position 56675714
2.Annotation Information
PubMed ID21998595
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21998595
StudyIdentification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry.
Disease/TraitHeight
Initial sample20,427 African ancestry individuals
Replication sampleUp to 16,436 African American individuals
Region15q25.2
Chromosome idchr15
Chromosome position83854003
Reported geneADAMTSL3
Mapped geneADAMTSL3
Upstream gene id
Downstream gene id
SNP gene ids57188
Upstream gene distance
Downstream gene distance
SNP risk allelers1383484-T
SNPsrs1383484
Merged0
SNP id current1383484
Contextintron_variant
Intergenic0
Allele frequency0.4
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.04
%95 Ci[0.024-0.056] unit increase
PlatformAffymetrix, Illumina [3310998] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001263