SNP Detail For rs138315285
1.Mapping Information
Human SNP ID rs138315285
Human chromosome chr11
Human SNP position 48042642
Pig chromosome chr2
Pig SNP position 15751300
2.Annotation Information
PubMed ID24357727
JournalBlood
Linkwww.ncbi.nlm.nih.gov/pubmed/24357727
StudyA meta-analysis of genome-wide association studies identifies ORM1 as a novel gene controlling thrombin generation potential.
Disease/TraitThrombin generation potential phenotypes
Initial sample714 European ancestry venous thrombosis cases, 1,253 European ancestry individuals
Replication sample714 European ancestry venous thrombosis cases, 543 European ancestry individuals
Region11p11.2
Chromosome idchr11
Chromosome position48042642
Reported geneNR
Mapped genePTPRJ
Upstream gene id
Downstream gene id
SNP gene ids5795
Upstream gene distance
Downstream gene distance
SNP risk allelers138315285-A
SNPsrs138315285
Merged0
SNP id current138315285
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000006
Pvalue mlog10.2218487496163
P value text(Peak)
Or beta35.81
%95 Ci[25.11-46.51] nM increase
PlatformNR [6652054] (imputed)
CNVN
Mapped traitthrombin generation potential measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005538
Study accessionGCST002315