Human SNP ID | rs138315285 |
---|---|
Human chromosome | chr11 |
Human SNP position | 48042642 |
Pig chromosome | chr2 |
Pig SNP position | 15751300 |
PubMed ID | 24357727 |
---|---|
Journal | Blood |
Link | www.ncbi.nlm.nih.gov/pubmed/24357727 |
Study | A meta-analysis of genome-wide association studies identifies ORM1 as a novel gene controlling thrombin generation potential. |
Disease/Trait | Thrombin generation potential phenotypes |
Initial sample | 714 European ancestry venous thrombosis cases, 1,253 European ancestry individuals |
Replication sample | 714 European ancestry venous thrombosis cases, 543 European ancestry individuals |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 48042642 |
Reported gene | NR |
Mapped gene | PTPRJ |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5795 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs138315285-A |
SNPs | rs138315285 |
Merged | 0 |
SNP id current | 138315285 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000000006 |
Pvalue mlog | 10.2218487496163 |
P value text | (Peak) |
Or beta | 35.81 |
%95 Ci | [25.11-46.51] nM increase |
Platform | NR [6652054] (imputed) |
CNV | N |
Mapped trait | thrombin generation potential measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005538 |
Study accession | GCST002315 |