SNP Detail For rs138048027
1.Mapping Information
Human SNP ID rs138048027
Human chromosome chr14
Human SNP position 84007953
Pig chromosome chr7
Pig SNP position 113054862
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region14q31.2
Chromosome idchr14
Chromosome position84007953
Reported geneIntergenic
Mapped geneLOC102724338 - MTND6P27
Upstream gene id102724338
Downstream gene id107133501
SNP gene ids
Upstream gene distance92593
Downstream gene distance167569
SNP risk allelers138048027-A
SNPsrs138048027
Merged0
SNP id current138048027
Contextintergenic_variant
Intergenic1
Allele frequency0.999
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.472
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264