Human SNP ID | rs138048027 |
---|---|
Human chromosome | chr14 |
Human SNP position | 84007953 |
Pig chromosome | chr7 |
Pig SNP position | 113054862 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1/FVC ratio |
Initial sample | 10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals |
Replication sample | NA |
Region | 14q31.2 |
Chromosome id | chr14 |
Chromosome position | 84007953 |
Reported gene | Intergenic |
Mapped gene | LOC102724338 - MTND6P27 |
Upstream gene id | 102724338 |
Downstream gene id | 107133501 |
SNP gene ids | |
Upstream gene distance | 92593 |
Downstream gene distance | 167569 |
SNP risk allele | rs138048027-A |
SNPs | rs138048027 |
Merged | 0 |
SNP id current | 138048027 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.999 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (AA) |
Or beta | 0.472 |
%95 Ci | unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | response to bronchodilator, FEV/FEC ratio |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST003264 |