SNP Detail For rs1380131
1.Mapping Information
Human SNP ID rs1380131
Human chromosome chr14
Human SNP position 53606140
Pig chromosome chr1
Pig SNP position 203464778
2.Annotation Information
PubMed ID21529783
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21529783
StudyA quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.
Disease/TraitAlcoholism (heaviness of drinking)
Initial sample2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls
Replication sample3,393 European ancestry individuals
Region14q22.2
Chromosome idchr14
Chromosome position53606140
Reported geneintergenic
Mapped geneLOC105370504
Upstream gene id
Downstream gene id
SNP gene ids105370504
Upstream gene distance
Downstream gene distance
SNP risk allelers1380131-C
SNPsrs1380131
Merged0
SNP id current1380131
Contextintron_variant
Intergenic0
Allele frequency0.07
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.147
%95 Ci[NR] unit increase
PlatformIllumina [~ 300000]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001052