SNP Detail For rs1378770
1.Mapping Information
Human SNP ID rs1378770
Human chromosome chr7
Human SNP position 114723511
Pig chromosome chr18
Pig SNP position 33639494
2.Annotation Information
PubMed ID26545240
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26545240
StudyGenetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative.
Disease/TraitPelvic organ prolapse (moderate/severe)
Initial sample154 African American cases, 948 African American controls, 163 Hispanic cases, 305 Hispanic controls
Replication sampleNA
Region7q31.1
Chromosome idchr7
Chromosome position114723511
Reported geneFOXP2
Mapped geneFOXP2 - MDFIC
Upstream gene id93986
Downstream gene id29969
SNP gene ids
Upstream gene distance29739
Downstream gene distance198643
SNP risk allelers1378770-G
SNPsrs1378770
Merged0
SNP id current1378770
Contextintergenic_variant
Intergenic1
Allele frequency0.15
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.8
%95 Ci
PlatformAffymetrix [at least 730985] (imputed)
CNVN
Mapped traitpelvic organ prolapse
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004710
Study accessionGCST003225