SNP Detail For rs1374879
1.Mapping Information
Human SNP ID rs1374879
Human chromosome chr3
Human SNP position 74585946
Pig chromosome chr13
Pig SNP position 61951007
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking quantity
Initial sample1,837 Bangladeshi ancestry males, 198 Bangladeshi ancestry females
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position74585946
Reported geneNR
Mapped geneCNTN3
Upstream gene id
Downstream gene id
SNP gene ids5067
Upstream gene distance
Downstream gene distance
SNP risk allelers1374879-?
SNPsrs1374879
Merged0
SNP id current1374879
Contextintergenic_variant
Intergenic0
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking behaviour measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005671
Study accessionGCST002393