Human SNP ID | rs1374879 |
---|---|
Human chromosome | chr3 |
Human SNP position | 74585946 |
Pig chromosome | chr13 |
Pig SNP position | 61951007 |
PubMed ID | 24665060 |
---|---|
Journal | J Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24665060 |
Study | Genome-wide association study of smoking behaviours among Bangladeshi adults. |
Disease/Trait | Smoking quantity |
Initial sample | 1,837 Bangladeshi ancestry males, 198 Bangladeshi ancestry females |
Replication sample | NA |
Region | 3p12.3 |
Chromosome id | chr3 |
Chromosome position | 74585946 |
Reported gene | NR |
Mapped gene | CNTN3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5067 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1374879-? |
SNPs | rs1374879 |
Merged | 0 |
SNP id current | 1374879 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1211988] (imputed) |
CNV | N |
Mapped trait | smoking behaviour measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005671 |
Study accession | GCST002393 |