SNP Detail For rs1370967
1.Mapping Information
Human SNP ID rs1370967
Human chromosome chr5
Human SNP position 111203694
Pig chromosome chr2
Pig SNP position 120503753
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (PAL4Q3)
Initial sampleup to 2,969 European ancestry individuals
Replication sampleNA
Region5q22.1
Chromosome idchr5
Chromosome position111203694
Reported geneCAMK4
Mapped geneRPS3AP21 - CAMK4
Upstream gene id402287
Downstream gene id814
SNP gene ids
Upstream gene distance10627
Downstream gene distance20555
SNP risk allelers1370967-A
SNPsrs1370967
Merged0
SNP id current1370967
Contextintergenic_variant
Intergenic1
Allele frequency0.04
P value0.0000008
Pvalue mlog6.09691001300805
P value text(Age 20-60 years)
Or beta2.21
%95 Ci[1.61-3.02]
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002136