Human SNP ID | rs1370967 |
---|---|
Human chromosome | chr5 |
Human SNP position | 111203694 |
Pig chromosome | chr2 |
Pig SNP position | 120503753 |
PubMed ID | 24024966 |
---|---|
Journal | J Clin Periodontol |
Link | www.ncbi.nlm.nih.gov/pubmed/24024966 |
Study | Genome-wide association study of chronic periodontitis in a general German population. |
Disease/Trait | Periodontitis (PAL4Q3) |
Initial sample | up to 2,969 European ancestry individuals |
Replication sample | NA |
Region | 5q22.1 |
Chromosome id | chr5 |
Chromosome position | 111203694 |
Reported gene | CAMK4 |
Mapped gene | RPS3AP21 - CAMK4 |
Upstream gene id | 402287 |
Downstream gene id | 814 |
SNP gene ids | |
Upstream gene distance | 10627 |
Downstream gene distance | 20555 |
SNP risk allele | rs1370967-A |
SNPs | rs1370967 |
Merged | 0 |
SNP id current | 1370967 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.04 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (Age 20-60 years) |
Or beta | 2.21 |
%95 Ci | [1.61-3.02] |
Platform | Affymetrix, Illumina [up to 17585496] (imputed) |
CNV | N |
Mapped trait | periodontitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000649 |
Study accession | GCST002136 |