SNP Detail For rs1355023
1.Mapping Information
Human SNP ID rs1355023
Human chromosome chr6
Human SNP position 105805124
Pig chromosome chr1
Pig SNP position 81414319
2.Annotation Information
PubMed ID23326517
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23326517
StudyInsights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis.
Disease/TraitAge-related macular degeneration
Initial sample3,772 European ancestry cases, 16,033 European ancestry controls
Replication sample264 Asian ancestry cases, 3,926 Asian ancestry controls
Region6q21
Chromosome idchr6
Chromosome position105805124
Reported geneintergenic
Mapped geneLOC105377923
Upstream gene id
Downstream gene id
SNP gene ids105377923
Upstream gene distance
Downstream gene distance
SNP risk allelers1355023-T
SNPsrs1355023
Merged0
SNP id current1355023
Contextregulatory_region_variant
Intergenic0
Allele frequency0.69
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.13
%95 Ci[1.07-1.20]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001814