Human SNP ID | rs1353531 |
---|---|
Human chromosome | chr19 |
Human SNP position | 31356001 |
Pig chromosome | chr6 |
Pig SNP position | 36870977 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 in COPD |
Initial sample | 5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases |
Replication sample | NA |
Region | 19q12 |
Chromosome id | chr19 |
Chromosome position | 31356001 |
Reported gene | Intergenic |
Mapped gene | LOC107985311 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 107985311 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1353531-T |
SNPs | rs1353531 |
Merged | 0 |
SNP id current | 1353531 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.817 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (AA) |
Or beta | 0.151 |
%95 Ci | NR unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST003263 |