SNP Detail For rs1348582
1.Mapping Information
Human SNP ID rs1348582
Human chromosome chr12
Human SNP position 20378822
Pig chromosome chr5
Pig SNP position 55959103
2.Annotation Information
PubMed ID20031603
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031603
StudyA genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
Disease/TraitQT interval
Initial sample2,325 European ancestry individuals
Replication sampleNA
Region12p12.2
Chromosome idchr12
Chromosome position20378822
Reported genePDE3A
Mapped genePDE3A
Upstream gene id
Downstream gene id
SNP gene ids5139
Upstream gene distance
Downstream gene distance
SNP risk allelers1348582-G
SNPsrs1348582
Merged0
SNP id current1348582
Contextintron_variant
Intergenic0
Allele frequency0.18
P value0.000001
Pvalue mlog6
P value text
Or beta0.2
%95 Ci[0.12-0.28] unit increase
PlatformIllumina [~ 318327]
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST000452