Human SNP ID | rs13430864 |
---|---|
Human chromosome | chr2 |
Human SNP position | 200783916 |
Pig chromosome | chr15 |
Pig SNP position | 115791076 |
PubMed ID | 22760553 |
---|---|
Journal | Transl Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22760553 |
Study | Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D. |
Disease/Trait | Response to citalopram treatment |
Initial sample | 1,392 European ancestry depression cases, 264 African American depression cases, 106 depression cases |
Replication sample | NA |
Region | 2q33.1 |
Chromosome id | chr2 |
Chromosome position | 200783916 |
Reported gene | AOX2P |
Mapped gene | AOX2P, LOC101927795 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 344454, 101927795 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13430864-G |
SNPs | rs13430864 |
Merged | 0 |
SNP id current | 13430864 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (EA + AA - Dizziness) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [421789] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST001591 |