Human SNP ID | rs13423976 |
---|---|
Human chromosome | chr2 |
Human SNP position | 38518482 |
Pig chromosome | chr3 |
Pig SNP position | 107957422 |
PubMed ID | 26528553 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer) |
Initial sample | 91 Hutterite individuals |
Replication sample | NA |
Region | 2p22.1 |
Chromosome id | chr2 |
Chromosome position | 38518482 |
Reported gene | NR |
Mapped gene | LOC101929596 - HNRNPLL |
Upstream gene id | 101929596 |
Downstream gene id | 92906 |
SNP gene ids | |
Upstream gene distance | 2742 |
Downstream gene distance | 44704 |
SNP risk allele | rs13423976-? |
SNPs | rs13423976 |
Merged | 0 |
SNP id current | 13423976 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (genus_Sporacetigenium) |
Or beta | 0.7243046 |
%95 Ci | [0.4-1.05] unit decrease |
Platform | Affymetrix [210924] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003221 |