SNP Detail For rs1342371
1.Mapping Information
Human SNP ID rs1342371
Human chromosome chr6
Human SNP position 44772212
Pig chromosome chr7
Pig SNP position 45635985
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region6p21.1
Chromosome idchr6
Chromosome position44772212
Reported geneSUPT3H
Mapped geneLOC101929770
Upstream gene id
Downstream gene id
SNP gene ids101929770
Upstream gene distance
Downstream gene distance
SNP risk allelers1342371-A
SNPsrs1342371
Merged0
SNP id current1342371
Contextintergenic_variant
Intergenic0
Allele frequency0.088
P value0.000002
Pvalue mlog5.69897000433601
P value text(IGF1 bound )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitIGF-1 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004627
Study accessionGCST001762