SNP Detail For rs13420028
1.Mapping Information
Human SNP ID rs13420028
Human chromosome chr2
Human SNP position 132430533
Pig chromosome chr15
Pig SNP position 22395033
2.Annotation Information
PubMed ID21626137
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21626137
StudyTwo-marker association tests yield new disease associations for coronary artery disease and hypertension.
Disease/TraitHypertension
Initial sample~2,000 European ancestry cases, ~3,000 European ancestry controls
Replication sampleNA
Region2q21.2
Chromosome idchr2;2
Chromosome position132431666;132430533
Reported geneGPR39
Mapped geneGPR39; GPR39
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers10188442-A; rs13420028-A
SNPsrs10188442; rs13420028
Merged0
SNP id current
Contextintron_variant; intron_variant
Intergenic
Allele frequencyNR
P value0.0000000001
Pvalue mlog10
P value text
Or beta
%95 Ci
PlatformAffymetrix [405022]
CNVN
Mapped traithypertension
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000537
Study accessionGCST001085