SNP Detail For rs1341665
1.Mapping Information
Human SNP ID rs1341665
Human chromosome chr1
Human SNP position 159721769
Pig chromosome chr12
Pig SNP position 48444195
2.Annotation Information
PubMed ID22291609
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22291609
StudyA genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation.
Disease/TraitInflammatory biomarkers
Initial sample4,694 Sardinian individuals
Replication sample1,392 Sardinian individuals
Region1q23.2
Chromosome idchr1
Chromosome position159721769
Reported geneCRP
Mapped geneCRP - RPL27P2
Upstream gene id1401
Downstream gene id646446
SNP gene ids
Upstream gene distance7160
Downstream gene distance37375
SNP risk allelers1341665-A
SNPsrs1341665
Merged0
SNP id current1341665
Contextintergenic_variant
Intergenic1
Allele frequency0.963
P value2E-20
Pvalue mlog19.698970004336
P value text(hsCRP)
Or beta
%95 Ci
PlatformAffymetrix [~ 1900000] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST001385