Human SNP ID | rs1341665 |
---|---|
Human chromosome | chr1 |
Human SNP position | 159721769 |
Pig chromosome | chr12 |
Pig SNP position | 48444195 |
PubMed ID | 22291609 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22291609 |
Study | A genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation. |
Disease/Trait | Inflammatory biomarkers |
Initial sample | 4,694 Sardinian individuals |
Replication sample | 1,392 Sardinian individuals |
Region | 1q23.2 |
Chromosome id | chr1 |
Chromosome position | 159721769 |
Reported gene | CRP |
Mapped gene | CRP - RPL27P2 |
Upstream gene id | 1401 |
Downstream gene id | 646446 |
SNP gene ids | |
Upstream gene distance | 7160 |
Downstream gene distance | 37375 |
SNP risk allele | rs1341665-A |
SNPs | rs1341665 |
Merged | 0 |
SNP id current | 1341665 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.963 |
P value | 2E-20 |
Pvalue mlog | 19.698970004336 |
P value text | (hsCRP) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [~ 1900000] (imputed) |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST001385 |