SNP Detail For rs13414205
1.Mapping Information
Human SNP ID rs13414205
Human chromosome chr2
Human SNP position 44435336
Pig chromosome chr3
Pig SNP position 102165847
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted TNF-alpha)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region2p21
Chromosome idchr2
Chromosome position44435336
Reported geneCAMKMT
Mapped geneCAMKMT
Upstream gene id
Downstream gene id
SNP gene ids79823
Upstream gene distance
Downstream gene distance
SNP risk allelers13414205-A
SNPsrs13414205
Merged0
SNP id current13414205
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000007
Pvalue mlog7.15490195998574
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001536