SNP Detail For rs1340043
1.Mapping Information
Human SNP ID rs1340043
Human chromosome chr9
Human SNP position 18458070
Pig chromosome chr1
Pig SNP position 227969069
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region9p22.2
Chromosome idchr9
Chromosome position18458070
Reported geneADAMTSL1
Mapped geneADAMTSL1
Upstream gene id
Downstream gene id
SNP gene ids92949
Upstream gene distance
Downstream gene distance
SNP risk allelers1340043-A
SNPsrs1340043
Merged0
SNP id current1340043
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.000009
Pvalue mlog5.04575749056067
P value text(Fat mass )
Or beta0.03
%95 Ci[NR] kg increase
PlatformIllumina [899892]
CNVN
Mapped traitbody composition measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005106
Study accessionGCST001762