SNP Detail For rs13400297
1.Mapping Information
Human SNP ID rs13400297
Human chromosome chr2
Human SNP position 227557073
Pig chromosome chr15
Pig SNP position 142882047
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitMild influenza (H1N1) infection
Initial sample107 European ancestry mild cases, 549 European ancestry population controls
Replication sampleNA
Region2q36.3
Chromosome idchr2
Chromosome position227557073
Reported geneAGFG1
Mapped geneAGFG1
Upstream gene id
Downstream gene id
SNP gene ids3267
Upstream gene distance
Downstream gene distance
SNP risk allelers13400297-?
SNPsrs13400297
Merged
SNP id current13400297
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.02138
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta5.151
%95 Ci[4.51-5.79]
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A (H1N1)
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001488
Study accessionGCST003124