Human SNP ID | rs13400297 |
---|---|
Human chromosome | chr2 |
Human SNP position | 227557073 |
Pig chromosome | chr15 |
Pig SNP position | 142882047 |
PubMed ID | 26379185 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26379185 |
Study | No Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity. |
Disease/Trait | Mild influenza (H1N1) infection |
Initial sample | 107 European ancestry mild cases, 549 European ancestry population controls |
Replication sample | NA |
Region | 2q36.3 |
Chromosome id | chr2 |
Chromosome position | 227557073 |
Reported gene | AGFG1 |
Mapped gene | AGFG1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3267 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13400297-? |
SNPs | rs13400297 |
Merged | |
SNP id current | 13400297 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.02138 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 5.151 |
%95 Ci | [4.51-5.79] |
Platform | Affymetrix [547296] |
CNV | N |
Mapped trait | influenza A (H1N1) |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_1001488 |
Study accession | GCST003124 |