Human SNP ID | rs133980 |
---|---|
Human chromosome | chr22 |
Human SNP position | 27626764 |
Pig chromosome | chr14 |
Pig SNP position | 47776449 |
PubMed ID | 25189868 |
---|---|
Journal | Am J Hypertens |
Link | www.ncbi.nlm.nih.gov/pubmed/25189868 |
Study | Gene-Smoking Interactions Identify Several Novel Blood Pressure Loci in the Framingham Heart Study. |
Disease/Trait | Blood pressure (smoking interaction) |
Initial sample | Up to 6,889 individuals |
Replication sample | NA |
Region | 22q12.1 |
Chromosome id | chr22 |
Chromosome position | 27626764 |
Reported gene | MN1 |
Mapped gene | LOC105372981 - MN1 |
Upstream gene id | 105372981 |
Downstream gene id | 4330 |
SNP gene ids | |
Upstream gene distance | 65279 |
Downstream gene distance | 121513 |
SNP risk allele | rs133980-? |
SNPs | rs133980 |
Merged | 0 |
SNP id current | 133980 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | (SBP,CPD) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [2485435] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure, cigarettes per day measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0006525 |
Study accession | GCST002587 |
PubMed ID | 25189868 |
Journal | Am J Hypertens |
Link | www.ncbi.nlm.nih.gov/pubmed/25189868 |
Study | Gene-Smoking Interactions Identify Several Novel Blood Pressure Loci in the Framingham Heart Study. |
Disease/Trait | Blood pressure (smoking interaction) |
Initial sample | Up to 6,889 individuals |
Replication sample | NA |
Region | 22q12.1 |
Chromosome id | chr22 |
Chromosome position | 27626764 |
Reported gene | MN1 |
Mapped gene | LOC105372981 - MN1 |
Upstream gene id | 105372981 |
Downstream gene id | 4330 |
SNP gene ids | |
Upstream gene distance | 65279 |
Downstream gene distance | 121513 |
SNP risk allele | rs133980-? |
SNPs | rs133980 |
Merged | 0 |
SNP id current | 133980 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (SBP,Pack-years) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [2485435] (imputed) |
CNV | N |
Mapped trait | pack-years measurement, systolic blood pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006526, http://www.ebi.ac.uk/efo/EFO_0006335 |
Study accession | GCST002587 |