Human SNP ID | rs13393173 |
---|---|
Human chromosome | chr2 |
Human SNP position | 168532581 |
Pig chromosome | chr15 |
Pig SNP position | 84114176 |
PubMed ID | 18615156 |
---|---|
Journal | Mol Med |
Link | www.ncbi.nlm.nih.gov/pubmed/18615156 |
Study | Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis. |
Disease/Trait | Response to TNF antagonist treatment |
Initial sample | 89 European ancestry cases |
Replication sample | NA |
Region | 2q24.3 |
Chromosome id | chr2 |
Chromosome position | 168532581 |
Reported gene | LASS6 |
Mapped gene | CERS6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 253782 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13393173-A |
SNPs | rs13393173 |
Merged | 0 |
SNP id current | 13393173 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.12 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [283348] |
CNV | N |
Mapped trait | response to TNF antagonist |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004653 |
Study accession | GCST000211 |