Human SNP ID | rs13388915 |
---|---|
Human chromosome | chr2 |
Human SNP position | 26049733 |
Pig chromosome | chr3 |
Pig SNP position | 119898876 |
PubMed ID | 22542470 |
---|---|
Journal | Vaccine |
Link | www.ncbi.nlm.nih.gov/pubmed/22542470 |
Study | Genome-wide association study of antibody response to smallpox vaccine. |
Disease/Trait | Immune response to smallpox vaccine (IL-6) |
Initial sample | 217 African American individuals, 580 European ancestry individuals, 217 Hispanic individuals |
Replication sample | NA |
Region | 2p23.3 |
Chromosome id | chr2 |
Chromosome position | 26049733 |
Reported gene | RAB10 |
Mapped gene | LOC105374333, RAB10 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105374333, 10890 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13388915-? |
SNPs | rs13388915 |
Merged | 0 |
SNP id current | 13388915 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (EA) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | response to vaccine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004645 |
Study accession | GCST001491 |