SNP Detail For rs1337875
1.Mapping Information
Human SNP ID rs1337875
Human chromosome chr1
Human SNP position 247895248
Pig chromosome chr2
Pig SNP position 56439808
2.Annotation Information
PubMed ID26029870
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26029870
StudyCommon variants at 10p12.31, 10q21.1 and 13q12.13 are associated with sporadic pituitary adenoma.
Disease/TraitSporadic pituitary adenoma
Initial sample771 Han Chinese cases, 2,788 Han Chinese controls
Replication sample2,542 Han Chinese cases, 3,620 Han Chinese controls
Region1q44
Chromosome idchr1
Chromosome position247895248
Reported geneNR
Mapped geneTRIM58 - OR2W3
Upstream gene id25893
Downstream gene id343171
SNP gene ids
Upstream gene distance15110
Downstream gene distance339
SNP risk allelers1337875-G
SNPsrs1337875
Merged
SNP id current1337875
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.37
%95 Ci[NR]
PlatformIllumina [720770]
CNVN
Mapped traitPituitary Gland Adenoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1000478
Study accessionGCST002940