Human SNP ID | rs13373941 |
---|---|
Human chromosome | chr1 |
Human SNP position | 239480871 |
Pig chromosome | chr14 |
Pig SNP position | 55914558 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1q43 |
Chromosome id | chr1 |
Chromosome position | 239480871 |
Reported gene | LOC100505872 |
Mapped gene | CHRM3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1131 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13373941-C |
SNPs | rs13373941 |
Merged | 0 |
SNP id current | 13373941 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.006 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (TNF-a ) |
Or beta | 0.03 |
%95 Ci | [NR] pg/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | tumor necrosis factor-alpha measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004684 |
Study accession | GCST001762 |