SNP Detail For rs13373941
1.Mapping Information
Human SNP ID rs13373941
Human chromosome chr1
Human SNP position 239480871
Pig chromosome chr14
Pig SNP position 55914558
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q43
Chromosome idchr1
Chromosome position239480871
Reported geneLOC100505872
Mapped geneCHRM3
Upstream gene id
Downstream gene id
SNP gene ids1131
Upstream gene distance
Downstream gene distance
SNP risk allelers13373941-C
SNPsrs13373941
Merged0
SNP id current13373941
Contextintron_variant
Intergenic0
Allele frequency0.006
P value0.000008
Pvalue mlog5.09691001300805
P value text(TNF-a )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traittumor necrosis factor-alpha measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004684
Study accessionGCST001762