SNP Detail For rs1337332
1.Mapping Information
Human SNP ID rs1337332
Human chromosome chr6
Human SNP position 114375626
Pig chromosome chr1
Pig SNP position 90341736
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region6q22.1
Chromosome idchr6
Chromosome position114375626
Reported geneHS3ST5
Mapped geneHS3ST5 - LOC105377959
Upstream gene id222537
Downstream gene id105377959
SNP gene ids
Upstream gene distance33193
Downstream gene distance101724
SNP risk allelers1337332-C
SNPsrs1337332
Merged0
SNP id current1337332
Contextintron_variant
Intergenic1
Allele frequency0.569
P value0.000007
Pvalue mlog5.15490195998574
P value text(EA, men)
Or beta0.022
%95 Ci[0.013-0.032] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783