Human SNP ID | rs1335587 |
---|---|
Human chromosome | chr13 |
Human SNP position | 101493209 |
Pig chromosome | chr11 |
Pig SNP position | 77370067 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 13q33.1 |
Chromosome id | chr13 |
Chromosome position | 101493209 |
Reported gene | ITGBL1 |
Mapped gene | ITGBL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9358 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1335587-G |
SNPs | rs1335587 |
Merged | 0 |
SNP id current | 1335587 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.404 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (BMI z-score change ) |
Or beta | 0.03 |
%95 Ci | [NR] SD/y increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001762 |