Human SNP ID | rs1333051 |
---|---|
Human chromosome | chr9 |
Human SNP position | 22136490 |
Pig chromosome | chr1 |
Pig SNP position | 223787728 |
PubMed ID | 21573907 |
---|---|
Journal | Diabetologia |
Link | www.ncbi.nlm.nih.gov/pubmed/21573907 |
Study | Genome-wide association study of type 2 diabetes in a sample from Mexico City and a meta-analysis of a Mexican-American sample from Starr County, Texas. |
Disease/Trait | Type 2 diabetes |
Initial sample | 1,804 Hispanic cases, 780 Hispanic controls |
Replication sample | European ancestry individuals |
Region | 9p21.3 |
Chromosome id | chr9 |
Chromosome position | 22136490 |
Reported gene | CDKN2A, CDKN2B |
Mapped gene | CDKN2B-AS1 - DMRTA1 |
Upstream gene id | 100048912 |
Downstream gene id | 63951 |
SNP gene ids | |
Upstream gene distance | 15393 |
Downstream gene distance | 310351 |
SNP risk allele | rs1333051-A |
SNPs | rs1333051 |
Merged | 0 |
SNP id current | 1333051 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000000006 |
Pvalue mlog | 9.22184874961635 |
P value text | |
Or beta | 1.22 |
%95 Ci | [1.15-1.30] |
Platform | Affymetrix [315658] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001070 |