SNP Detail For rs1333051
1.Mapping Information
Human SNP ID rs1333051
Human chromosome chr9
Human SNP position 22136490
Pig chromosome chr1
Pig SNP position 223787728
2.Annotation Information
PubMed ID21573907
JournalDiabetologia
Linkwww.ncbi.nlm.nih.gov/pubmed/21573907
StudyGenome-wide association study of type 2 diabetes in a sample from Mexico City and a meta-analysis of a Mexican-American sample from Starr County, Texas.
Disease/TraitType 2 diabetes
Initial sample1,804 Hispanic cases, 780 Hispanic controls
Replication sampleEuropean ancestry individuals
Region9p21.3
Chromosome idchr9
Chromosome position22136490
Reported geneCDKN2A, CDKN2B
Mapped geneCDKN2B-AS1 - DMRTA1
Upstream gene id100048912
Downstream gene id63951
SNP gene ids
Upstream gene distance15393
Downstream gene distance310351
SNP risk allelers1333051-A
SNPsrs1333051
Merged0
SNP id current1333051
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.0000000006
Pvalue mlog9.22184874961635
P value text
Or beta1.22
%95 Ci[1.15-1.30]
PlatformAffymetrix [315658]
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST001070