SNP Detail For rs1333048
1.Mapping Information
Human SNP ID rs1333048
Human chromosome chr9
Human SNP position 22125348
Pig chromosome chr1
Pig SNP position 223798206
2.Annotation Information
PubMed ID21626137
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21626137
StudyTwo-marker association tests yield new disease associations for coronary artery disease and hypertension.
Disease/TraitCoronary heart disease
Initial sample~2,000 European ancestry cases, ~3,000 European ancestry controls
Replication sampleNA
Region9p21.3
Chromosome idchr9;9
Chromosome position22125504;22125348
Reported geneCDKN2A, CDKN2B
Mapped geneCDKN2B-AS1 - DMRTA1; CDKN2B-AS1 - DMRTA1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers1333049-G; rs1333048-G
SNPsrs1333049; rs1333048
Merged0
SNP id current
Contextdownstream_gene_variant; downstream_gene_variant
Intergenic
Allele frequencyNR
P value0.00000000000007
Pvalue mlog13.1549019599857
P value text(Coronary artery disease)
Or beta
%95 Ci
PlatformAffymetrix [407576]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST001084